“Seyed Amir Malekpour”


IPM Positions

Senior Post-Doctoral Research Fellow, School of Biological Sciences
(2010 - Present )

Related Papers

1. A. Yaghoobi and S.A. Malekpour
Unraveling the genetic architecture of blood unfolded p-53 among non-demented elderlies: novel candidate genes for early Alzheimer's disease
BMC Genomics 25 (2024),   [abstract]
2. S.A. Malekpour, L. Haghverdi and M. Sadeghi
Single-cell multi-omics analysis identifies context-specific gene regulatory gates and mechanisms
Briefings in Bioinformatics (2024),   [abstract]
3. S.A.. Malekpour, M. Shahdoust, R. Aghdam and M. Sadeghi
wpLogicNet: logic gate and structure inference in gene regulatory networks
Bioinformatics (2023),   [abstract]
4. S. A. Malekpour, A. R. Alizad-Rahvar and M. Sadeghi
LogicNet: probabilistic continuous logics in reconstructing gene regulatory networks
BMC Bioinformatics 21 (2020), 1-21  [abstract]
5. C. Razavi Pashabayg, N. Momenifar, S. A. Malekpour, M. Sadeghi, A. Rahimi Foroushani, H. Rafatpanah, N. Valizadeh, F. Sabet, S. M. Jazayeri, H. Keyvani, S. A. Rezaee and M. Norouzi
Phylogenetic and phylodynamic study of Human T-cell lymphotropic virus Type 1 (HTLV-1) in Iran
Infection, Genetics and Evolution (Accepted) [abstract]
6. S. A. Malekpour, P. Pakzad, M. H. Foroughmand-Araabi, S. Goliaei, R. Tusserkani, B. Goliaei and M. Sadeghi
Modeling the probability distribution of the bacterial burst size via a game-theoretic approach
Journal of bioinformatics and computational biology 16 (2018), https://doi.org/10.1142/S0219720018500129  [abstract]
7. A. Malekpour, H. Pezeshk and M. Sadeghi
MSeq-CNV: accurate detection of Copy Number Variation from Sequencing of Multiple samples
Scientific Reports 8 (2018), doi:10.1038/s41598-018-22323-8  [abstract]
8. H. Mozhgani, A. Malekpour, M. Norouzi, F. Ramezani, A. Rezaee, V. Poortahmasebi, M. Sadeghi, M. Alavian, M. Zarei-Ghobadi, A. Ghaziasadi, H. Karimzadeh, R. Malekzadeh, M. Ziaee, F. Abedi, B. Ataei, M. Yaran, B. Sayad, H. Jahantigh, M. Somi, Gh. Sarizadeh, I. Sanei-Moghaddam, F. Mansour-Ghanaei, H. Keyvani, E. Kalantari, Z. Fakhari, B. Geravand and M. Jazayeri
Molecular evolution and phylodynamics of hepatitis B virus infection circulating in Iran
Archive of Virology (2018), 1-10  [abstract]
9. M. Sadeghi, H. Pezeshk, R. Tusserkani, A. Sharifi Zarchi, S.A. Malekpour-Nargesi, Mehdi. Foroughmand, S. Goliaei, M. Totonchi and N. Ansari-Pour
The Role and Importance of Genome Sequencing in Prediction of Cancer Risk
Bioengineering and Pharmaceutical Engineering 11 (2017), 455-460  [abstract]
10. A. Malekpour, H. Pezeshk and M. Sadeghi
PSE-HMM: genome-wide CNV detection from NGS data using an HMM with Position-Specific Emission probabilities
BMC Bioinformatics https://doi.org/10.1186/s12859-016-1296-y (2016), 1-30  [abstract]
11. S. A. Malekpour, H. Pezeshk and M. Sadeghi
MGP-HMM: detecting genome-wide CNVs using an HMM for modeling mate pair insertion sizes and read counts
Mathematical Biosciences (2016), 53-62  [abstract]
12. R. Aghdam. , H. Pezeshk. , S.A. Malekpour. , S. Shemehsavar. , M. Sadeghi. and C. Eslahchi.
A Clustering Approach for Estimating Parameters of a Profle Hidden Markov Model
International Journal of Data Mining and Bioinformatics 8 (2012), 66-82  [abstract]
13. H. Pezeshk. , S. Naghizadeh. , S. A. Malekpour. , C. Eslahchi. and M. Sadeghi.
A Modified Bidirectional Hidden Markov Model And Its Application In Protein Secondary Structure Prediction
Proceeding of the Second International Conference on Advanced Computer Control 3 (2010), 535-538  [abstract]
14. R. Aghdam. , H. Pezeshk. , S.A. Malekpour. , S. Shemehsavar. , M. Sadeghi. and C. Eslahchi.
A Bidirectional Bayesian Monte Carlo Approach For Estimating Parameters Of A Profile Hidden Markov Model
Applied Science Segment 1 (2010),   [abstract]
15. S. A. Malekpour. , S. Naghizadeh . , H. Pezeshk. , M. Sadeghi. and C. Eslahchi.
Protein secondary structure prediction using three neural networks and a segmental semi Markov model
Mathematical Biosciences 217 (2009), 145-150  [abstract]
16. S. A. Malekpour. , S. Naghizadeh. , H. Pezeshk. , M. Sadeghi. and C. Eslahchi.
A Segmental Semi Markov Model For Protein Secondary Structure Prediction
Mathematical Biosciences 221 (2009), 130-135  [abstract]
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