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IPM
30
YEARS OLD

“Mehdi Sadeghi”


IPM Positions

Head, School of Biological Sciences
Senior Researcher, School of Biological Sciences
(2006 - Present )

Related Papers

1. M. Shahdoust, H. Mahjub, H. Pezeshk and M. Sadeghi
A Network-based Comparison between Molecular Apocrine Breast Cancer Tumors and Basal and Luminal Tumors by Joint Graphical Lasso
computational biology and bioinformatics DOI: 10.1109/TCBB.2019.2911074 (2019),   [abstract]
   
2. S. A. Malekpour, P. Pakzad, M. H. Foroughmand-Araabi, S. Goliaei, R. Tusserkani, B. Goliaei and M. Sadeghi
Modeling the probability distribution of the bacterial burst size via a game-theoretic approach
16 (2018), https://doi.org/10.1142/S0219720018500129  [abstract]
   
3. A. R. Alizad-Rahvar and M. Sadeghi
Ambiguity in logic-based models of gene regulatory networks: An integrative multi-perturbation analysis
PlosOne 13 (2018), https://doi.org/10.1371/journal.pone.0206976  [abstract]
   
4. N. Ejlali, H. Pezeshk, Y. P. Chaubey and M. Sadeghi
Parrondo's Paradox for Games with Three Players
Technical Report 983832/1/ report No. 1/18 (2018) (2018), Spectrum: Concordia University, https://spectrum.library.concordia.ca/983832/1/report1-18.pdf  [abstract]
   
5. A. Malekpour, H. Pezeshk and M. Sadeghi
MSeq-CNV: accurate detection of Copy Number Variation from Sequencing of Multiple samples
Scientific Reports 8 (2018), doi:10.1038/s41598-018-22323-8  [abstract]
   
6. J. Salimi Sartakhti, M. H. Manshaei and M. Sadeghi
MMP–TIMP interactions in cancer invasion: An evolutionary game-theoretical framework
Journal of Theoretical Biology 412 (2017), 17-26 (https://doi.org/10.1016/j.jtbi.2016.09.019)  [abstract]
   
7. J. Salimi Sartakhti, M. H. Manshaei, D. Basanta and M. Sadeghi
Evolutionary emergence of angiogenesis in avascular tumors using a spatial public goods game
Plos One 12 (2017), https://doi.org/10.1371/journal.pone.0175063  [abstract]
   
8. N. Ejlali, M. R. Faghihi and M. Sadeghi
Bayesian comparison of protein structures using partial Procrustes distance
Statistical applications in genetics and molecular biology 16 (2017), 243-257 (https://doi.org/10.1515/sagmb-2016-0014)  [abstract]
   
9. B. Khazaei, J. Salimi Sartakhti, M. H. Manshaei, Q. Zhu, M. Sadeghi and S. R. Mousavi
HIV-1-infected T-cells dynamics and prognosis: An evolutionary game model
Computer Methods and Programs in Biomedicine 152 (2017), 1-14 (https://doi.org/10.1016/j.cmpb.2017.08.021)  [abstract]
   
10. F. Mohseni-Salehi, F. Zare-Mirakabad, S. Ghafouri-Fard and M. Sadeghi
The effect of stochasticity on repair of DNA double strand breaks throughout non-homologous end joining pathway
Mathematical medicine and biology: a journal of the IMA (2017), https://doi.org/10.1093/imammb/dqx017  [abstract]
   
11. M. Sadeghi, H. Pezeshk, R. Tusserkani, A. Sharifi Zarchi, S.A. Malekpour-Nargesi, Mehdi. Foroughmand, S. Goliaei, M. Totonchi and N. Ansari-Pour
The Role and Importance of Genome Sequencing in Prediction of Cancer Risk
Bioengineering and Pharmaceutical Engineering 11 (2017), 455-460  [abstract]
   
12. A. Sharifi-Zarchi, D. Gerovska, K. Adachi, M. Totonchi, H. Pezeshk, R. J. Taft, H. R. Schöler, . Chitsaz, M. Sadeghi, B. Baharvand and M. J. Araúzo-Bravo
DNA methylation regulates discrimination of enhancers from promoters through a H3K4me1-H3K4me3 seesaw mechanism
BMC Genomics 18 (2017), 964  [abstract]
   
13. A. Fotoohinasab, E. Fatemizadeh, H. Pezeshk and M. Sadeghi
Denoising of genetic switches based on Parrondos paradox
Physica A: Statistical Mechanics and its Applications 493 (2017), 410-420  [abstract]
   
14. M. Shahdoust, H. Pezeshk, H. Mahjub and M. Sadeghi
F-MAP: A Bayesian approach to infer the gene regulatory network using external hints
PlosOne 19 (2017), https://doi.org/10.1371/journal.pone.0184795  [abstract]
   
15. F. Dorri, H. Pezeshk and M. Sadeghi
Stochastic Cell Fate and Longevity of Offspring
Cell Journal 19 (2017), 343-350  [abstract]
   
16. A. Malekpour, H. Pezeshk and M. Sadeghi
PSE-HMM: genome-wide CNV detection from NGS data using an HMM with Position-Specific Emission probabilities
BMC Bioinformatics https://doi.org/10.1186/s12859-016-1296-y (2016), 1-30  [abstract]
   
17. R. Jafari, M. Sadeghi and M. Mirzaie
Investigating the importance of Delaunay-based definition of atomic interactions in scoring of protein–protein docking results
J. Mol. Graphics and Modelling 16 (2016), 108�??114�??�??  [abstract]
   
18. S. A. Malekpour, H. Pezeshk and M. Sadeghi
MGP-HMM: detecting genome-wide CNVs using an HMM for modeling mate pair insertion sizes and read counts
Mathematical Biosciences (2016), 53-62  [abstract]
   
19. N. Ejlali. , H. Pezeshk. and M. Sadeghi.
A Note on the Parrondo's Paradox
The 10th Seminar on Probabilty and Stochastic Processes (2015), 140  [abstract]
   
20. P. Khosravi. , V. H. Gazestani. , B. Law. , G. D. Bader. and M. Sadeghi.
Comparative analysis of co-expression networks reveals molecular changes during the cancer progression
IFMBE 51 (2015), 1481  [abstract]
   
21. P. Khosravi. , V. H. Gazestani. , L. Pirhaji. , B. Law. , M. Sadeghi. , B. Goliaei. and G. D. Bader.
Inferring interaction type in gene regulatory networks using co-expression data
AMB Vol: 10, DOI: 10.1186/s13015-015-0054-4 (2015), 23  [abstract]
   
22. A. Sharifi-Zarchi. , M. Totonchi. , K. Khaloughi. , R. Karamzadeh. , M. J. Araúzo-Bravo. , H. Baharvand. , R. Tusserkani. , H. Pezeshk. , H. R. Chitsaz. and M. Sadeghi.
Increased robustness of early embryogenesis through collective decision-making by key transcription factors
BMC Systems Biology DOI:10.1186/s12918-015-0169-8 (2015),   [abstract]
   
23. P. Khosravi. , V. H. Gazestani. , M. Akbarzadeh. , S. Mirkhalaf. , M. Sadeghi. and B. Goliaei.
Comparative Analysis of Prostate Cancer Gene Regulatory Networks via Hub Type Variation
Avicenna J Med Biotech 7 (2015), 8-15  [abstract]
   
24. M.. Pourkamali Anarak, M.. Sadeghi and .
Efficient fast heuristic algorithms for minimum error correction haplotyping from SNP fragments
International journal of computational biology and drug design 7 (2014), 358 - 368  [abstract]
   
25. P. Khosravi. , J. Zahiri. , V. H. Gazestani. , S. Mirkhalaf. , M. Akbarzadeh. , M. Sadeghi. and B. Goliaei.
Analysis of Candidate Genes Has Proposed the Role of Y Chromosome in Human Prostate Cancer
Iranian Journal of Cancer Prevention 7 (2014), 204-211  [abstract]
   
26. P. Khosravi. , V. H. Gazestani. , Y. Asgari. , B. Law. , M. Sadeghi. and B. Goliaei.
Network-based approach reveals Y chromosome influences prostate cancer susceptibility
Computers in Biology and Medicine 54 (2014), 24-31  [abstract]
   
27. M. Heidari. , S. A. Marashi. , R. Tusserkani. and M. Sadeghi.
Reconstruction of phylogenetic trees of prokaryotes using maximal common intervals
Biosystems 124 (2014), 86-94  [abstract]
   
28. F, Dorri. , H. Mahini. , A. Sharifi-Zarchi. , M. Totonchi. , R. Tusserkani. , H. Pezeshk. and M. Sadeghi.
Natural Biased Coin Encoded in the Genome Determines Cell Strategy
Plos One 9 (2014), e103569  [abstract]
   
29. S. N. Hassani. , M. Totonchi. , A. Sharifi-Zarchi. , S. Mollamohammadi. , M. Pakzad. , S. Moradi. , A. Samadian. , N. Masoudi. , S. Mirshahvaladi. , A. Farrokhi. , B, Greber. , M. J. Araúzo-Bravo. , D. Sabour. , M. Sadeghi. , G. Hosseini Salekdeh. , G. Gourabi. , H. R. Schöler. and H. Baharvand.
Inhibition of TGFβ Signaling Promotes Ground State Pluripotency
Stem Cell Reviews and Reports 10 (2014), 16-30  [abstract]
   
30. M. H. Foroughmand-Araabi. , B. Goliaei. , K. Alishahi. and M. Sadeghi.
Dependency of codon usage on protein sequence patterns: a statistical study
Theoretical Biology and Medical Modelling 11 (2014), 2  [abstract]
   
31. M. P. Naeini. , B. Moshiri. , B. N. Araabi. and M. Sadeghi.
Learning by abstraction: Hierarchical classification model using evidential theoretic approach and Bayesian ensemble model, Neurocomputing
Neurocomputing 130 (2014), 73-82  [abstract]
   
32. E. S. Ansari. , H. Pezeshk. , M. Sadeghi. and C. Eslahchi.
ProDomAs; Protein Domain Assignment Algorithm using Centre-Based Clustering and Independent Dominating Set
Proteins: Structure, Function and Bioinformatics 82 (2014), 1937�??1946  [abstract]
   
33. V. Eskandari. , B. Yakhchali. , M. Sadeghi. and A. A. Karkhane.
In silico design and construction of metal binding hybrid proteins for specific removal of cadmium based on CS3 pili display on the surface of Escherichia coli
Biotechnology and applied biochemistry 60 (2013), 564-572  [abstract]
   
34. M. A. Haghighi. , A. M. Mobarez. , A. H. Salmanian. , M. Moazeni. , M. R. Zali. , M. Sadeghi. and J. Amani.
In silico experiment with an antigen-toll-like receptor-5 agonist fusion construct for immunogenic application to Helicobacter pylori
Indian journal of human genetics 19 (2013), 43  [abstract]
   
35. G. Mahdevar. , A. Nowzari-Dalini. and M. Sadeghi.
Inferring gene correlation networks from transcription factor binding sites
Genes & genetic systems 88 (2013), 301-309  [abstract]
   
36. N. Zeinalzadeh. , G. Ahangari. , M. Sadeghi. , J. Amani. , S. Z. Bathaie. and M. Jafari.
Design and characterization a chimeric multi-epitope construct containing CfaB, ST toxoid, CssA, CssB and LTB of Enterotoxigenic
Biotechnology and applied biochemistry (2013),   [abstract]
   
37. V.Rezaei. , S. Naghizadeh. , H. Pezeshk. , M. Sadeghi. and C. Eslahchi.
Comparison of the bidirectional Baum-Welch algorithm and the Baum-Welch algorithm on regular lattice
Progress in Biological Sciences 2 (2013), 14-22  [abstract]
   
38. M. Jafari. , M.Mirzaie. , M. Sadeghi. , S. A. Marashi. and M. Rezaei-Tavirani.
Exploring biological processes involved in embryonic stem cell differentiation by analyzing proteomic data
BBA 1834 (2013), 1063-1069  [abstract]
   
39. M.Vahed. , E.Motalebi. , G. Rigi. , K. Akbari Noghabi. , M. Soudi. , M. Sadeghi. and G. Ahmadian.
Improving chitinolytic activity of Bacillus pumilus SG2 by random mutagenesis
Journal of Microbiol Biotechnol 23 (2013), 1519-1528  [abstract]
   
40. M. H. Foroughmand-Araabi. , B. Goliaei. and M. Sadeghi.
iProsite: an improved prosite database achieved by replacing ambiguous positions with more informative representations
Progress in Biological Sciences 3 (2013), 67-81  [abstract]
   
41. S. N. Hassani. , M. Totonchi. , A. Sharifi-Zarchi. , S. Mollamohammadi. , M. Pakzad. , S. Moradi. , A. Samadian. , N. Masoudi. , S. Mirshahvaladi. , A. Farrokhi. , B. Greber. , M. J. Araúzo-Bravo. , D. Sabour. , M. Sadeghi. , G. Hosseini Salekdeh. , H. Gourabi. , H. R. Schöler. and H. Baharvand.
Inhibition of TGFβ Signaling Promotes Ground State Pluripotency
Stem Cell Rev and Rep 10 (2013), 16-30  [abstract]
   
42. M. Mirzaie. and M. Sadeghi.
Delaunay-based non-local interactions are sufficient and accurate in protein fold recognition
Proteins: Structure, Function and Bioinformatics 82 (2013), 415-423  [abstract]
   
43. M. Jafari. , M. Sadeghi. , M. Mirzaie. , S. A. Marashi. and M. Rezaei-Tavirani.
Evolutionarily conserved motifs and modules in mitochondrial protein-protein interaction networks
Mitochondrion 13 (2013), 668-675  [abstract]
   
44. V.Rezaei. , H. Pezeshk. , M. Sadeghi. and C. Eslahchi.
Assignment Of Protein Sequences To Protein Family Profiles Using Spatial Statistics.
MATCH Communication in Methematical and in Computer Chemistry 69 (2013), 7-24  [abstract]
   
45. Z. Safikhani. , M. Sadeghi. , H. Pezeshk. and C. Eslahchi.
SSP: An interval integer linear programming for de novo transcriptome assembly and isoform discovery of RNA-seq reads
Genomics 102 (2013), 507-514  [abstract]
   
46. E. Salehghamari. , J. Hamedi. , E. Elahi. , Z. Sepehrizadeh. , M. Sadeghi. and G. Muth.
Prediction of the pho regulon in Streptomyces clavuligerus DSM
New Microbiologica 35 (2012), 447  [abstract]
   
47. R. Aghdam. , H. Pezeshk. , S.A. Malekpour. , S. Shemehsavar. , M. Sadeghi. and C. Eslahchi.
A Clustering Approach for Estimating Parameters of a Profle Hidden Markov Model
International Journal of Data Mining and Bioinformatics 8 (2012), 66-82  [abstract]
   
48. M. Mirzarezaei. , M. Sadeghi. and B. N. Araabi.
Construction and analysis of tissue-specific protein-protein interaction network in humans
Progress in Biological Sciences 2 (2012), 1-13  [abstract]
   
49. C. Eslahchi. , R. Hassanzadeh. , E. Mottaghi. , M. Habibi. , H. Pezeshk. and M. Sadeghi.
Constructing Circular Phylogenetic Networks From Weighted Quartets Using Simulated Annealing
Mathematical Biosciences 235 (2012), 123-127  [abstract]
   
50. M. Mirzaie. and M. Sadeghi.
Distance-Dependent Atomic Knowledge-Based Force In Protein Fold Recognition
Protein Journal 80 (2012), 683-690  [abstract]
   
51. K. Kavousi. , M. Sadeghi. , B. Moshiri. , B. N. Araabi. and A. A. Moosavi-Movahedi.
Evidence Theoretic Protein Fold Classification Based On The Concept Of Hyperfold
Mathematical Biosciences 240 (2012), 148-160  [abstract]
   
52. Gh. Mahdevar. , M. Sadeghi. and A. Nowzari-Dalini.
Transcription Factor Binding Sites Detection By Using Alignment-Based Approach
Journal of Theoretical Biology 304 (2012), 96-102  [abstract]
   
53. M. Habibi. , C. Eslahchi. , H. Pezeshk. and M. Sadeghi.
An Information Theoretic Approach To Secondary Structure Assignment
MATCH Communications in Mathematical and in Computer Chemistry 65 (2011), 5-20  [abstract]
   
54. K. Kavousi. , B. Moshiri. , M. Sadeghi. , B. N. Araabi. and A. A. Moosavi-Movahedi.
A Protein Fold Classifier Formed By Fusing Different Modes Of Pseudo Amino Acid Composition Via PSSM
Computational Biology and Chemistry 35 (2011), 1-9  [abstract]
   
55. P. Zakeri. , B. Moshiri. and M. Sadeghi.
Prediction Of Protein Submitochondria Locations Based On Data Fusion Of Various Features Of Sequences
Journal of Theoretical Biology 269 (2011), 208-216  [abstract]
   
56. M. Mirzarezaee. , M. Sadeghi. and B. N. Araabi.
Dynamical Analysis Of Yeast Protein Interaction Network During The Sake Brewing Process
Microbiology 49 (2011), 965-973  [abstract]
   
57. G. A. Kardar. , A. Zomorodipour. , M. Moin. , Z. Pourpak. , M. Sadeghi. and F. Ataei.
The effects of novel mutations in A1 domain of human coagulation factor VIII on its secretion level in cultured mammalian cells
IRANIAN JOURNAL of BIOTECHNOLOGY 8 (2010),   [abstract]
   
58. S. Ghasemi. , G. Ahmadian. , M. Sadeghi. , D. R. Zeigler. , H. Rahimian. , S. Ghandili. , N. Naghibzadeh. and A. Dehestani .
First report of a bifunctional chitinase/lysozyme produced by Bacillus pumilus SG2
Enzyme and microbial technology 48 (2010), 225-231  [abstract]
   
59. S.Arab. , C. Eslahchi. , M. Sadeghi. , H. Pezeshk. and A. Sheari.
A Pairwise Residue Contact Area-Based Mean Force Potential For Discrimination Of Native Protein Structure
BMC Bioinformatics 11 (2010), 16  [abstract]
   
60. H. Pezeshk. , S. Naghizadeh. , S. A. Malekpour. , C. Eslahchi. and M. Sadeghi.
A Modified Bidirectional Hidden Markov Model And Its Application In Protein Secondary Structure Prediction
Proceeding of the Second International Conference on Advanced Computer Control 3 (2010), 535-538  [abstract]
   
61. G. Mahdevar. , J. Zahiri. , M. Sadeghi. , A. Nowzari-Dalini. and H. Ahrabian.
Tag SNP Selection Via A Genetic Algorithm
Biomed Inform 43 (2010), 800-804  [abstract]
   
62. M. Habibi. , C. Eslahchi. , M. Sadeghi. and H. Pezeshk.
The Interpretation Of Protein Structures Based On Graph Theory And Contact Map
Open Access Bioinformatics 2 (2010), 127-137  [abstract]
   
63. J. Zahiri. , G. Mahdevar. , A. Nowzari-dalini. , H. Ahrabian. and M. Sadeghi.
A Novel Efficient Dynamic Programming Algorithm For Haplotype Block Partitioning
Journal of Theoretical Biology 267 (2010), 164-170  [abstract]
   
64. M. Sadeghi. , H. Pezeshk. , C. Eslahchi. , S. Ahmadian. and S. Mah Abadi.
Construction Of Random Perfect Phylogeny Matrix
Advances and Applications in Bioinformatics and Chemistry 3 (2010), 89-96  [abstract]
   
65. C. Eslahchi. , H. Pezeshk. , M. Sadeghi. , P. Giabbanelli. , F. Movahedi. and V.A. Dabbaghian.
A Probabilistic Model For The Spread Of HIV Infection Among Injection Drug Users
World Journal of Modelling and Simulation 6 (2010), 267-273  [abstract]
   
66. A. Meshkin. , N. Ghasem Aghaee. and M. Sadeghi.
Modeling And Implementing An Agent-Based System For Prediction Of Protein 3 Relative Solvent Accessibility
Expert Systems with Applications 38 (2010), 6324-6332  [abstract]
   
67. M. Mirzarezaee. , B. N. Araabi. and M. Sadeghi.
Features Analysis For Identification Of Date And Party Hubs In Protein Interaction Network Of Saccharomyces Cerevisiae
BMC Systems Biology 4 (2010), 172  [abstract]
   
68. M. Mirzarezaee. , B. N. Araabi. and M. Sadeghi.
Comparison Of Hubs In Effective Normal And Tumor Protein Interaction Networks
Basic and Clinical Neuroscience 2 (2010), 44-50  [abstract]
   
69. R. Aghdam. , H. Pezeshk. , S.A. Malekpour. , S. Shemehsavar. , M. Sadeghi. and C. Eslahchi.
A Bidirectional Bayesian Monte Carlo Approach For Estimating Parameters Of A Profile Hidden Markov Model
Applied Science Segment 1 (2010),   [abstract]
   
70. M. Mirzaie. and M. Sadeghi.
Knowledge-Based Potentials In Protein Fold Recognition
Journal of Paramedical Sciences 1 (2010), 65-75  [abstract]
   
71. H. Mirzaei. , S. Ahmadian. , S. Mahabadi. , M. Sadeghi. , C. Eslahchi. and H. Pezeshk.
An Algorithm for Construction of All Perfect Phylogeny Matrices
MATCH Communication in Methematical and in Computer Chemistry 62 (2009), 251  [abstract]
   
72. M. Mirzaie. , C. Eslahchi. , H. Pezeshk. and M. Sadeghi.
A distance-dependent atomic knowledge based potential and force for discrimination of native structures from decoys
Proteins: Structure, Function and Bioinformatics 77 (2009), 454-463  [abstract]
   
73. A. Meshkin. , M. Sadeghi. and N. Ghasem-Aghaee.
Prediction of Relative Solvent Accessibility using Pace Regression
Excli journal 8 (2009), 211-217  [abstract]
   
74. F. Zare-Mirakabad. , M. Sadeghi. , H. Ahrabian. and A. Nowzari-Dalini.
RNAComp: A New Method For RNA Secondary Structure Alignment
Match 61 (2009), 789  [abstract]
   
75. S. A. Malekpour. , S. Naghizadeh . , H. Pezeshk. , M. Sadeghi. and C. Eslahchi.
Protein secondary structure prediction using three neural networks and a segmental semi Markov model
Mathematical Biosciences 217 (2009), 145-150  [abstract]
   
76. C. Eslahchi. , H. Pezeshk. , M. Sadeghi. , A. M. Rahimi. , H. Maboudi Afkham. and S. Arab.
STON: Anovel method for protein three-dimensional structure comparison
Computers in Biology and Medicine 39 (2009), 166-172  [abstract]
   
77. M. Kargar. , H. Poormohammadi. , L. Pirhaji. , M. Sadeghi. , H. Pezeshk. and C. Eslahchi.
Enhanced Evolutionary And Heuristic Algorithms For Haplotype Reconstruction Problem Using Minimum Error Correction Model
Match 62 (2009), 261-274  [abstract]
   
78. C. Eslahchi. , H. Pezeshk. , M. Sadeghi. and A. S. Attar.
LIBRA: A de Novo Motif Finding In Promoter Sequences Based On Linear Algebra. Proceedings of world Academy of Science
Engineering and Technology 37 (2009), 507-512  [abstract]
   
79. F. Zare-Mirakabad. , H. Ahrabian. , M. Sadeghi. , S. Hashemifar. , A. Nowzari-Dalini. and B. Goliaei.
Genetic Algorithm For Dyad Pattern Finding In DNA Sequences
Genes & genetic systems 84 (2009), 81-93  [abstract]
   
80. F. Zare-Mirakabad. , P. Davoodi. , H. Ahrabian. , A. Nowzari-Dalini. , M. Sadeghi. and B. Goliaei.
Finding Motifs Based On Suffix Trie
Advanced Modeling and Optimization 11 (2009), 177-194  [abstract]
   
81. F. Zare-Mirakabad. , H. Ahrabian. , M. Sadeghi. , A. Nowzari-Dalini. and B. Goliaei.
New Scoring Schema For Finding Motifs In DNA Sequences
BMC Bioinformatics 10 (2009), 93  [abstract]
   
82. M. Mirzaie. , C. Eslahchi. , H. Pezeshk. and M. Sadeghi.
A Distance Dependent Atomic Knowledge Based Potential And Force For Discrimination Of Native Structures From Decoys
Protein Journal 77 (2009), 454-463  [abstract]
   
83. S. A. Malekpour. , S. Naghizadeh. , H. Pezeshk. , M. Sadeghi. and C. Eslahchi.
A Segmental Semi Markov Model For Protein Secondary Structure Prediction
Mathematical Biosciences 221 (2009), 130-135  [abstract]
   
84. A. Katanforoush. , M. Sadeghi. , H. Pezeshk. and E. Elahi.
Global Haplotype Partitioning For Maximal Associated SNP Pairs
BMC Bioinformatics 10 (2009), 269  [abstract]
   
85. L. Pirhaji. , M. Kargar. , A. Sheari. , H. Poormohamadi. , M. Sadeghi. , H. Pezeshk. and C. Eslahchi.
The Performance Of Chi-Square Test And Complexity Measures For Signal Recognition In Biological Sequences
Journal of Theoretical Biology 251 (2008), 380-387  [abstract]
   
86. A. Sheari. , M. Kargar. , A. Katanforoush. , S. Arab. , M. Sadeghi. , H. Pezeshk. , C. Eslahchi. and S. A. Marashi.
A Tale of two Symmetrical Tails: Structural and Functional Charateristics of Palindroms in Proteins
BMC Bioinformatics 9 (2008), 274  [abstract]
   
87. A. Momen-Roknabadi. , M. Sadeghi. , H. Pezeshk. and S. A. Marashi.
Impact of Residue Accessible Surface Area on the Prediction of Protein Secondary Structures
BMC Bioinformatics 9 (2008), 357  [abstract]
   
88. M. Habibi. , C. Eslahchi. , H. Pezeshk. and M. Sadeghi.
An Information Theoritical Approch To Secondary Structure Assignment
Iran. Int. J. Sci. 34 (2008), 41-48  [abstract]
   
89. S. Naghizadeh. , H. Pezeshk. , M. Sadeghi. , M. Mohammadzadeh. and C. Eslahchi.
A MODIFICATION ON A LEFT-TO-RIGHT AND RIGHT-TO-LEFT DEPENDENCY MODEL FOR SECONDARY STRUCTURE PREDICTION
Iran. Int. J. Sci. 34 (2008), 61-66  [abstract]
   
90. S. R. Hosseini. , M. Sadeghi. , H. Pezeshk. , C. Eslahchi. and M. Habibi.
PROSIGN: A Method for Protein Secondary Structure Assignment Based on Three-Dimensional Coordinates of Cosecutive Ca atoms
Computational Biology and Chemistry 32 (2008), 406-411  [abstract]
   
91. N. K. Tafreshi. , S. Hosseinkhani. , M. Sadeghizadeh. , M. Sadeghi. , B. Ranjbar. and H. Naderi-Manesh.
The Influence of Insertion of a Critical Residue (Arg356) in Structure and Bioluminescence Spectra of Firefly Luciferase
Journal of Biological Chemistry 282 (2007), 8641-8647  [abstract]
   
92. K. Khalifeh. , B. Ranjbar. , K. Khajeh. , H. Naderi-Manesh. , M. Sadeghi. and S. Gharavi.
A stopped-flow fluorescence study of the native and modified lysozyme
Biologia 62 (2007), 258-264  [abstract]
   
93. C. Eslahchi. , M. Sadeghi. , H. Pezeshk. , M. Kargar. and H. Poormohammadi.
Haplotyping Problem, A Clustering Approach
AIP 936 (2007), 185-190  [abstract]
   
94. S. A. Marashi. , M. Kargar. , A. Katanforoush. , H. Abolhasani. and M. Sadeghi.
Evolution of Ligand-Diffusion Chreods on Protein-Surface Models:A Genetic Algorithm Study
Chemistry and Biodivrsity 4 (2007), 2766-2771  [abstract]
   
95. R. Zarei. , S. Arab. and M. Sadeghi.
A Method for Protein Accessibility Prediction Based on Residue types and Conformational States
Computational Biology and Chemistry 31 (2007), 384-388  [abstract]
   
96. C. Eslahchi. , M. Sadeghi. , H. Pezeshk. , M. Kargar. and H. Poormohamadi.
American Institute of Physics Conference Proceedings
AIP CONF PROC 936 (2007),   [abstract]
   
97. S. Arab. , F. Didehvar. , C. Eslahchi. and M. Sadeghi.
Helix Segment Assignment In Proteins Using Fuzzy Logic
IRANIAN JOURNAL of BIOTECHNOLOGY 5 (2007), 93-99  [abstract]
   
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