Theoretical Neuroscience Journal Club (online)
Understanding spike-field coupling: A window for uncovering the organization of neural circuits
Understanding spike-field coupling: A window for uncovering the organization of neural circuits
Dr. Shervin Safavi, Max Planck institute for Biological Cybernetics
30 SEP 2021
15:30 - 17:00
Organized by: School of Cognitive Sciences
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Abstract:
Modern multi-channel recording devices offer the opportunity to untangle the coordination mechanisms of neural activity at a mesoscopic level. However, this requires novel multivariate analysis techniques that link the high-dimensional data with biophysically realistic models of network activity. We develop a methodology to generalize the analysis of spike-field coupling (SFC) to the multi-channel setting, while allowing interpretability of such coupling based on neural field models of network activity. SFC characterizes the relation between the spiking activity of individual neurons and field activity, reflecting mesoscopic network dynamics, and typically measured by Local Field Potentials (LFP). Although SFC approaches have been extensively applied, they were focused on quantifying coupling one pair at a time (between one unit and one LFP channel), thereby remaining largely blind to the population-level interactions that generate them. As a consequence, the rich spatiotemporal patterns of spikes and LFPs remained largely under-exploited, despite the insights into the underlying circuit dynamics they may provide.
We introduce "Generalized Phase Locking Analysis (GPLA)" that summarizes the spike-field coupling from multi-channel data by three interpretable quantities: LFP and spike vectors represent the dominant spatial distribution and relative phase shifts of neuronal ensemble and field activity in the recorded structure, while the generalized Phase Locking Value quantifies the strength of the coupling between these patterns.
Furthermore, we demonstrate the capability and interpretability of GPLA with various simulated and experimental datasets. First, GPLA’s performance is superior to univariate measures in the presence of large amounts of noise. Next, the application of GPLA on simulations of hippocampal sharp-wave-ripples (SWR) reveals various characteristics of hippocampal circuitry (e.g. communication flow from CA3 to CA1 during the SWR) with minimal prior knowledge. Finally, combining neural field simulations and GPLA applied on Utah array data recorded from anesthetized macaque reveals synchronized clusters of sites/neurons. This global pattern of synchronization PFC supports long-range excitatory horizontal connections and strong local recurrent inhibition as a plausible connectivity scheme of the recorded structure (ventrolateral Prefrontal Cortex), that has been partially verified experimentally.
Lastly, we address one of the challenges of statistical analysis of parallel spike trains by taking a step beyond bootstrapping methods. We exploit novel statistical frameworks, namely the random matrix theory, and provide an analytical significance test. This is of paramount importance given the increasing dimensionality of modern recording techniques, such as Neuropixel, that need computationally efficient statistical tests.
In summary, with GPLA, we can quantify, characterize, and statistically assess the interactions between population spiking activity and mesoscopic network dynamics.
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